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Matrix Science mascot version 2.6
Mascot Version 2.6, supplied by Matrix Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/mascot+version+2%2E6/mascot+software/pmc10483633__pnas__2304851120__sapp-129-33-36
Average 90 stars, based on 1 article reviews
mascot version 2.6 - by Bioz Stars, 2026-10
90/100 stars

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Data-dependent acquisition:

Article Title: Limited proteolysis of mycobacterial DNA-binding protein 1 with an extended, lysine-rich, intrinsically disordered region to unveil posttranslational modifications.
Article Snippet: The basic, intrinsically disordered regions of eukaryotic histones and their bacterial counterparts are presumed to act as signaling hubs to regulate the compaction of chromosomes or nucleoids and various DNA processes such as gene expression, recombination, and DNA replication.. Posttranslational modifications (PTMs) on these regions are pivotal in regulating chromosomal or nucleoid compaction and DNA processes.. However, the low sequence complexity and the presence of short lysine-rich repeats in the regions have hindered the accurate determination of types and locations of PTMs using conventional proteomic procedures.

Article Title: Effect of Matrix Metalloproteinase 23 Accelerating Wound Healing Induced by Hydroxybutyl Chitosan.
Article Snippet: Skin wounds may cause severe financial and social burden due to the difficulties in wound healing.. Original inert dressings cannot meet multiple needs in the process of wound healing.. Therefore, the development of materials to accelerate healing progress is essential and urgent.

Article Title: Adaptation of a microbial community to demand-oriented biological methanation
Article Snippet: Three different types of search engines were used for peptide spectral matching: X!Tandem [ ], OMSSA [ ] and MASCOT (version 2.6, Matrix Science, London, England) [ ].

Article Title: Supporting Information for Differential second messenger signaling via dopamine neurons bidirectionally regulates memory retention
Article Snippet: The cultured neurons were transferred to a Tokai-Hit Imaging Chamber (INUG2-KRI-H2A14A, Tokai Hit, Shizuoka-ken, Japan), which was maintained at 25°C with 5% CO2, and images were captured every hour using Nikon Inverted Microscope Eclipse Ti-E (Nikon Corp., Japan) with ORCA-Flash 4.0 V2 digital CMOS camera (Hamamatsu Photonics, Hamamatsu, Japan) and a 40× oil-immersion lens (numerical aperture 1.4) (Nikon Corp., Japan).

Article Title: A carboxy-terminal ubiquitylation site regulates androgen receptor activity
Article Snippet: MS/MS spectra were analyzed using Mascot version 2.6 (Matrix Science) by searching the reversed and concatenated human protein database ( http://www.ebi.ac.uk/uniprot/database/download.html ) with a parent ion tolerance of 15 ppm and fragment ion tolerance of 0.05 Da.

Article Title: Diverse nature of ClpX degradation motifs in Streptococcus mutans .
Article Snippet: Data files from MudPIT were merged and searched with Mascot version 2.6 (Matrix Science) against the S. mutans UA159 protein database (4,840 sequences) with a reversed-sequence decoy database search, applying a significance threshold of P < 0.05.

Article Title: Postnatal expression of cell cycle promoter Fam64a causes heart dysfunction by inhibiting cardiomyocyte differentiation through repression of Klf15.
Article Snippet: DATABASE SEARCHING– The raw files were searched against the Mus musculus dataset (Uniprot Proteome ID UP000000589 2019.06.11 downloaded, 55,197 sequences; 22,986,518 residues) combined with the FLAG-tagged Fam64a sequence and the common Repository of Adventitious Proteins (cRAP, ftp:// ftp.thegpm.org/fasta/cRAP) using MASCOT version 2.6 (Matrix Science) via Proteome discoverer 2.2 (Thermo-Fisher), with a false discovery rate (FDR) set at 0.01.

Article Title: Diverse nature of ClpX degradation motifs in Streptococcus mutans
Article Snippet: Data files from MudPIT were merged and searched with Mascot version 2.6 (Matrix Science) against the S. mutans UA159 protein database (4,840 sequences) with a reversed-sequence decoy database search, applying a significance threshold of P < 0.05.



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